Up: Components summary
Up: Components summary
Author
Juha Koiranen| Component | Version | Inputs | Outputs | Description |
|---|---|---|---|---|
| DMML | 1.0 | input_files, sample_compositions, index_file | params, probs, pvalues, map_estimates, expected_values, diff_meth | Identifies differentially methylated sites in tumor samples with varying, unknown tumor cell fraction using a maximum-likelihood method. |
| QUBICClusterer | 1.0 | in | rowClust, colClust | Qualitative biclustering algorithm (QUBIC). https://bioconductor.org/packages/release/bioc/html/QUBIC.html. |