Up: Components summary Author

Kari Nousiainen

Component Version Inputs Outputs Description
AffyReader 1.1.2 affy, sampleNames expr, exprRaw, groups Imports gene expression or exon array data from Affymetrix CEL-files.
GSEAAnalyzer 1.0 annotation, expr, sampleGroupTable report, ResultTable Performs Gene Set Enrichment Analysis by using category definitions from KEGG or GO.
LinearNormalizer 1.0 in out Normalizes the input matrix column-wise.
MDSPlot 2.2 expr, groups mdsCoOrdinates, report Plots multidimensional scaling of numeric data.
SampleCombiner 1.0 in, groups out Combines expression data from several samples into one by taking means, medians or log ratios.

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