| Component |
Version |
Inputs |
Outputs |
Description |
| CSVFilter |
1.1.1 |
in, aux, includeColumnsFile |
out |
Filters columns and/or rows from CSV files using flexible criteria. |
| GOFilter |
1.2 |
bioAnnotation, in |
out |
Filters gene lists based on Gene Ontology annotations. |
| GOSearch |
1.1 |
bioAnnotation, go |
hits |
Filters gene lists based on Gene Ontology annotations. |
| MarkerCorrelations |
1.1 |
genotypes |
markerGroups, keyMarkers |
Combines correlating markers from the SNPMatrices. |
| QuantileFilter |
1.0 |
in1, in2 |
out1, out2 |
Filters values from numeric matrices that are below or above
quantile limits. |
| SampleCombiner |
1.0 |
in, groups |
out |
Combines expression data from several samples into one by taking means, medians or
log ratios. |
| SequenceFilter |
1.0 |
sequences |
selection |
Filters out nucleotide sequences that do not satisfy the criteria. |
| TableQuery |
1.3 |
table1, table2, table3, table4, table5, table6, table7, table8, table9, table10, table11, table12, table13, table14, table15, tables, queryFile, columnTypes |
table |
Executes an SQL query on CSV tables and creates a result table. |
| VariationFilter |
1.1 |
in |
out |
Filters out rows from a matrix where the standard deviation
is below (or above) a threshold. |
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Filter