##fileformat=VCFv4.1
##reference=NCBI37;
##INFO=<ID=NS,Number=1,Type=Integer,Description="Number of Samples With Data">
##INFO=<ID=END,Number=1,Type=Integer,Description="End position of the variant described in this record">
##INFO=<ID=IMPRECISE,Number=0,Type=Flag,Description="Imprecise structural variation">
##INFO=<ID=BKPT,Number=-1,Type=String,Description="Breakpoint type of an imprecise structural variation">
##INFO=<ID=SVLEN,Number=-1,Type=Integer,Description="Difference in length between REF and ALT alleles">
##INFO=<ID=MATEID,Number=1,Type=String,Description="ID of partner breakend together with which novel adjacency is formed">
##INFO=<ID=SVTYPE,Number=1,Type=String,Description="Type of structural variant">
##INFO=<ID=CN,Number=1,Type=Integer,Description="Copy number">
##ALT=<ID=DEL,Description="Deletion">
##ALT=<ID=DUP:TANDEM,Description="Tandem Duplication">
##ALT=<ID=INS,Description="Insertion of novel sequence">
##ALT=<ID=INV,Description="Inversion">
##ALT=<ID=ADJ,Description="Novel adjacency">
##FILTER=<ID=q0,Description="Quality score of being variant below 0">
##FILTER=<ID=overlap,Description="Indicates that the variant overlaps with another variant">
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO
chrX	60051	.	N	<CNV>	.	PASS	NS=1;SVTYPE=CNV;END=66651;CN=3
chrX	70151	.	N	<CNV>	.	PASS	NS=1;SVTYPE=CNV;END=71651;CN=4
chrX	75301	.	N	<CNV>	.	PASS	NS=1;SVTYPE=CNV;END=80351;CN=3
chrX	81201	.	N	<CNV>	.	PASS	NS=1;SVTYPE=CNV;END=82051;CN=3
chrX	82951	.	N	<CNV>	.	PASS	NS=1;SVTYPE=CNV;END=86251;CN=3
chrX	87801	.	N	<CNV>	.	PASS	NS=1;SVTYPE=CNV;END=88901;CN=3
chrX	91701	.	N	<CNV>	.	PASS	NS=1;SVTYPE=CNV;END=93751;CN=3
chrX	155001	.	N	<CNV>	.	PASS	NS=1;SVTYPE=CNV;END=155751;CN=4
chrX	157551	.	N	<CNV>	.	PASS	NS=1;SVTYPE=CNV;END=161151;CN=4
chrX	162201	.	N	<CNV>	.	PASS	NS=1;SVTYPE=CNV;END=185301;CN=3
chrX	192001	.	N	<CNV>	.	PASS	NS=1;SVTYPE=CNV;END=196901;CN=3
chrX	200601	.	N	<CNV>	.	PASS	NS=1;SVTYPE=CNV;END=213701;CN=3
chrX	215451	.	N	<CNV>	.	PASS	NS=1;SVTYPE=CNV;END=231351;CN=3
chrX	281401	.	N	<CNV>	.	PASS	NS=1;SVTYPE=CNV;END=288901;CN=3
chrX	290151	.	N	<CNV>	.	PASS	NS=1;SVTYPE=CNV;END=291301;CN=3
chrX	291351	.	N	<CNV>	.	PASS	NS=1;SVTYPE=CNV;END=292251;CN=4