Up: Component summary
Up: Component summary
Component
RiskRatioPlotCreates a visualization for a list of risk ratios and their confidence intervals. Missing values are plotted with gray crosses.
This is a simple example output.
| Version | 1.0 |
|---|---|
| Bundle | microarray |
| Categories | Plot |
| Authors | Marko Laakso (Marko.Laakso@Helsinki.FI) |
| Issue tracker | View/Report issues |
| Requires | R |
| Source files | component.xml RiskRatioPlot.r |
| Usage | Example with default values |
Inputs| Name | Type | Mandatory | Description |
|---|---|---|---|
| in | CSV | Mandatory | Risk ratios and their confidence intervals |
Outputs| Name | Type | Description |
|---|---|---|
| out | Latex | Latex subsection containing the visualization. |
Parameters| Name | Type | Default | Description |
|---|---|---|---|
| RR | string | (no default) | Name of the risk ratio column |
| caption | string | "Visualization of risk rations" | Figure caption for the document template. |
| height | float | 11 | Height of the plot in centimeters. |
| lCI | string | (no default) | Name of the column that contains the lower limit of the confidence interval |
| names | string | "" | Name of the column that contains the item names. A numeric labeling of x-axis is used if this parameter is missing. |
| pageBreak | boolean | false | Use pageclean after the section. |
| title | string | "Risk ratios" | Main title plot. |
| uCI | string | (no default) | Name of the column that contains the upper limit of the confidence interval |
| width | float | 14 | Width of the plot in centimeters |
| xlabel | string | "Entries" | Label for x-axis in plot. |
| ylabel | string | "risk ratio" | Label for y-axis in plot. |
Test cases| Test case | Parameters▼ | IN in |
OUT out |
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|---|---|---|---|---|---|---|
| case1 | properties | in | out | |||
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title = Risk ratio example, |
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