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Component
SBML2HTMLPrints the contents of an SBML model as a HTML file.
The libSBML library with Java support is needed. When compiling libSBML on Unix, use "configure --with-java" to enable Java support. You may need to compile with -O0 instead of -O2; replace all instances of -O2 with -O0 in ./configure of libSBML (only) if the default -O2 does not work. You need to put both libsbmlj.so and libsbml.so on your library path.
| Version | 1.0 |
|---|---|
| Bundle | tools |
| Categories | Pathway HTML |
| Authors | Kristian Ovaska (kristian.ovaska@helsinki.fi) |
| Issue tracker | View/Report issues |
| Requires | colt.jar (jar) ; csbl-javatools.jar (jar) ; jung-algorithms-2.0.jar (jar) ; jung-api-2.0.jar (jar) ; jung-graph-impl-2.0.jar (jar) ; libsbmlj.jar (jar) |
| Source files | component.xml |
| Usage | Example with default values |
Inputs| Name | Type | Mandatory | Description |
|---|---|---|---|
| model | SBML | Mandatory | The SBML model. |
Outputs| Name | Type | Description |
|---|---|---|
| report | HTML | The HTML report. |
Test cases| Test case | Parameters▼ | IN model |
OUT report |
|---|---|---|---|
| case1 | (missing) | model | (missing) |