Up: Component summary
Up: Component summary
Component
SkeletonFeaturesExtracts intensity information from a grayscale image, using a skeleton mask
| Version | 1.0 |
|---|---|
| Bundle | anima |
| Categories | Image Analysis |
| Authors | Ville Rantanen (ville.rantanen@helsinki.fi) |
| Issue tracker | View/Report issues |
| Requires | Matlab |
| Source files | component.xml skelintensity.m skelwalker.m execute.m |
| Usage | Example with default values |
Inputs| Name | Type | Mandatory | Description |
|---|---|---|---|
| skeleton | ImageList | Mandatory | A directory with BW skeleton image files. |
| images | ImageList | Mandatory | A directory with grayscale image files. |
| names | ImageList | Optional | A directory with the original image files, for naming the table. If omitted, names from "skeleton" are used. |
Outputs| Name | Type | Description |
|---|---|---|
| out | CSV | List of feature values. |
| points | ImageList | Images marking the key points. Branch points are marked with 0.5 intensity, end points are marked with full (1) intensity. |
Parameters| Name | Type | Default | Description |
|---|---|---|---|
| maxDist | int | 0 | Create an artificial branch-point after N steps. |
Test cases| Test case | Parameters▼ | IN skeleton |
IN images |
IN names |
OUT out |
OUT points |
|---|---|---|---|---|---|---|
| case1 | (missing) | skeleton | images | (missing) | out | (missing) |