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Introduction
Installation & Usage
Installation
Installation using OS X and Docker
Command-line usage
Cluster & Docker deployment
Worked Examples
Workflows
Getting started: Hello world
Linear workflow
Branching and merging
Array ports
Iteration
Dynamic workflows
Organizing workflows
Annotations
Log levels
Reference: Component naming
Components
Basic components
External scripts
CSV/TSV processing
Visualization
Extending
Overview
Component bundle
Component types
Component interface
Implementing: Atomic
Implementing: Composite
Testing
Examples
Practical Examples
FASTQ QC
BULK RNA-seq Analysis
Bisulfite Preprocessing
More Examples
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More good examples can be found from anduril bitbucket repository
wiki
.